Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Mouse nonproductive mRNA for T-cell receptor alpha chain (TA31) Message-ID: Date: 27 May 91 12:43:46 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 45 Approved: lear@genbank.bio.net Checksum: 61260 3 LOCUS MUSTCRA31 398 bp ss-mRNA ROD 27-MAY-1991 DEFINITION Mouse nonproductive mRNA for T-cell receptor alpha chain (TA31) ACCESSION X02928 KEYWORDS T-cell receptor; T-cell receptor alpha; constant region; joining region; signal peptide; variable region. SOURCE Mus musculus RNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 398) AUTHORS Arden,B., Klotz,J.L., Siu,G. and Hood,L. TITLE Diversity and structure of genes of the alpha family of mouse T-cell antigen receptor JOURNAL Nature 316, 783-787 (1985) STANDARD full automatic COMMENT *source: clone=TA31; strain=C57Bl/Ka; tissue=thymus; The V-J rearrangement shifts the J-sequence out of the correct reading frame, the transcript is thought to be nonproductive. From EMBL entry MMTCRA31; dated 02-APR-1988. FEATURES Location/Qualifiers CDS 1..54 /note="put. signal peptide (aa -18 to -1)" /codon_start=1 CDS 55..324 /note="put. V(alpha) 1 segment" /codon_start=55 misc_feature 325..341 /note="put. frameshifting junctional region" CDS 342..393 /note="put. J(alpha) segment" /codon_start=342 CDS 394..>398 /note="C(alpha) segment" /codon_start=394 BASE COUNT 107 a 106 c 92 g 93 t ORIGIN 1 ttgagtgttt tactagtggt cctgtggctc cagttaaact gcgtgaggag ccagcagaag 61 gtgcagcaga gcccagaatc cctcagtgtc ccagagagca tggcctctct caactgcact 121 tcaagtgatc gtaattttca gtacttctgg tggtacagac agcattctgg agaaggcccc 181 aaggcactga tgtccatctt ctctgatggt gacaagaaag aaggcagatt cacagctcac 241 ctcaataagg ccagcctgca tgtttccctg cacatcagag actcccagcc cagtgactcc 301 gctctctact tctgtgcagc tagtgagcat gagccaacta tggaaatgag aaaataactt 361 ttggggctgg aaccaaactc accattaaac ccaacatc //