Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA72) Message-ID: Date: 27 May 91 12:43:59 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 53 Approved: lear@genbank.bio.net Checksum: 38188 3 LOCUS MUSTCRA72 360 bp ss-mRNA ROD 27-MAY-1991 DEFINITION Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA72) ACCESSION X02933 KEYWORDS T-cell receptor; T-cell receptor alpha; constant region; joining region; signal peptide; variable region. SOURCE Mus musculus RNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 360) AUTHORS Arden,B., Klotz,J.L., Siu,G. and Hood,L. TITLE Diversity and structure of genes of the alpha family of mouse T-cell antigen receptor JOURNAL Nature 316, 783-787 (1985) STANDARD full automatic COMMENT *source: strain=C57Bl/Ka; clone=TA72; The 3' end of V(alpha) segment was determined referring to germline V(alpha) 5H gene segment (see X02833). The 5' end of the J(alpha) segment was determined by assuming that it begins one codon after the end of the V(alpha) segment. From EMBL entry MMTCRA72; dated 02-APR-1988. FEATURES Location/Qualifiers CDS 1..>360 /note="precursor" /codon_start=1 CDS 1..18 /note="put. signal peptide (aa -6 to -1)" /codon_start=1 CDS 19..>360 /note="put. mature alpha chain (aa 1-114)" /codon_start=19 CDS 19..294 /note="put. V(alpha) 5 segment" /codon_start=19 CDS 295..297 /note="put. junctional diversity region" /codon_start=295 CDS 298..352 /note="put. J(alpha) segment (352 is 1st base in codon)" /codon_start=298 CDS 353..>360 /note="C(alpha) segment (353 is 2nd base in codon)" /codon_start=353 BASE COUNT 98 a 94 c 91 g 77 t ORIGIN 1 aactgtgtga gcagaggcga gcaggtggag cagcgccctc ctcacctgag tgtccgggag 61 ggagacagtg ccgttatcat ctgcacctac acagacccta acagttatta cttcttctgg 121 tacaagcaag agccgggggc aggtcttcag ttgcttatga aggttttctc aagtacggaa 181 ataaacgaag gacaaggatt cactgtccta ctgaacaaga aagacaaaca actctctctg 241 aacctcacag ctgcccatcc tggggactca gccgtgtact tctgcgcagt cagggccaac 301 atgggctaca aacttacctt cgggacagga acaagcttgt tggttgatcc aaacatccag //