Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA61) Message-ID: Date: 27 May 91 12:43:55 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 45 Approved: lear@genbank.bio.net Checksum: 09191 3 LOCUS MUSTCRA61 237 bp ss-mRNA ROD 27-MAY-1991 DEFINITION Mouse mRNA fragment for T-cell receptor alpha chain V-J-C (TA61) ACCESSION X02936 KEYWORDS T-cell receptor; T-cell receptor alpha; constant region; joining region; variable region. SOURCE Mus musculus RNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 237) AUTHORS Arden,B., Klotz,J.L., Siu,G. and Hood,L. TITLE Diversity and structure of genes of the alpha family of mouse T-cell antigen receptor JOURNAL Nature 316, 783-787 (1985) STANDARD full automatic COMMENT *source: clone=TA61; strain=C57Bl/Ka; The 3' end of V(alpha) segment was determined referring to germline V(alpha) 5H gene segment (see X02833). The 5' end of the J(alpha) segment was determined by assuming that it begins one codon after the end of the V(alpha) segment. From EMBL entry MMTCRA61; dated 02-APR-1988. FEATURES Location/Qualifiers CDS <1..>237 /note="alpha chain fragment (put. aa 37-116)" /codon_start=1 CDS <1..168 /note="put. V(alpha) 8 segment (put. aa 37-93)" /codon_start=1 CDS 169..171 /note="junctional diversity region" /codon_start=169 CDS 172..226 /note="put. J(alpha) segment" /codon_start=172 CDS 227..>237 /note="C(alpha) segment" /codon_start=227 BASE COUNT 63 a 77 c 54 g 43 t ORIGIN 1 gtgcagtatc tcaacgaagc ccctcaggta ctcctgaaga gctccacaga caacaagagg 61 accgagcacc aagggttcca cgccactctc cataagagca gcagctcctt ccatctgcag 121 aagtcctcgc agctgtcaga ctctgccctg tactactgtg ctctccccgg cggcaataca 181 ggcaaattaa cctttgggga tgggaccgtg ctcacagtga agccaaacat ccagaac //