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From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human papillomavirus (HPV) long control region
Message-ID: <May.28.11.42.32.1991.8146@genbank.bio.net>
Date: 28 May 91 18:42:33 GMT
Sender: will@genbank.bio.net
Distribution: bionet
Lines: 55
Approved: lear@genbank.bio.net
Checksum: 59862     3

LOCUS       PPHVLCR       758 bp ds-DNA             VRL       28-MAY-1991
DEFINITION  Human papillomavirus (HPV) long control region
ACCESSION   X52062
KEYWORDS    E2-dependent enhancer; long control region; promoter.
SOURCE      Human papillomavirus DNA.
  ORGANISM  Human papillomavirus
            Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
            Papillomavirus.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Ensser,A.
  JOURNAL   Unpublished (1990)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Ensser,A. and Pfister,H.
  TITLE     Epidermodysplasia verruciformis associated human papillomaviruses
            present a subgenus-specific organisation of the regulatory genome
            region
  JOURNAL   Nucleic Acids Res. 18, 3919-3922 (1990)
  STANDARD  full staff_review
COMMENT     *source: strain=HPV type 9. See <X52059>-<X52062>.
            
            From EMBL    entry HPVLCR;  dated 13-JUL-1990.
FEATURES             Location/Qualifiers
     misc_feature    241..243
                     /note="ORF L1 transcription stop"
     misc_feature    243..254
                     /note="E2-binding site (E2-BS)"
     misc_feature    313..319
                     /note="AP1 binding site"
     misc_feature    343..354
                     /note="E2-binding site (E2-BS)"
     misc_feature    472..483
                     /note="E2-binding site (E2-BS)"
     promoter        521..540
                     /note="CAAT box"
     misc_feature    562..573
                     /note="E2-binding site (E2-BS)"
     misc_feature    610..612
                     /note="ORF E6 transcription start"
BASE COUNT      248 a    145 c    137 g    228 t
ORIGIN
        1 atctacagat atattgcttc aaaagccaca aaatgcccag atgctgttga gcctacagaa
       61 aaagaagatc cctttgccaa atactcattt tggaaagtgg atctaactga aagattatcg
      121 ttggatcttg atcaatatcc tttaggtaga aaatttcttt ttcaagctgg tttgcaaaca
      181 cgaaaacgtc ctattaaaac atctgttaaa acatctaaaa atgctaagag aaggcgaacc
      241 taaccgatat cggtttccaa taaaatttaa gttatccaat ttggtatgtg aagcattttt
      301 taaccatctt cgtgactaaa ccgtacaagt caacacagag cgaccgcacc cggtttatct
      361 gattataaag tgcacctggt gcaatttgaa caatactatc gtggaatcac cgcaggcaac
      421 cgccaatttc actgccaagg ttcgttggca gaccgtcctg gcttcaaaac gaccgataac
      481 ggtaagtctt ggcacgtagg tggttatttg atcgttggga tgattgtggt taacaacaat
      541 ctacatacac attttcatat gaccgccttc gttaataagc ttatatagac ataaatatat
      601 aaaggtgcca tgtatttaac agagcagatt atggacaggc caaaacctag aacagtaaag
      661 gaactagcag acactcttgt gattccttta atagatttgt tgataccttg taaattttgc
      721 aatagatttt tatcttattt tgagctactt aattttga
//