Path: utzoo!utgpu!news-server.csri.toronto.edu!bonnie.concordia.ca!uunet!bionet!will From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human papillomavirus (HPV) long control region Message-ID: Date: 28 May 91 18:42:37 GMT Sender: will@genbank.bio.net Distribution: bionet Lines: 58 Approved: lear@genbank.bio.net Checksum: 20741 3 LOCUS PPHVLCR3 1038 bp ds-DNA VRL 28-MAY-1991 DEFINITION Human papillomavirus (HPV) long control region ACCESSION X52060 KEYWORDS E2-dependent enhancer; long control region; promoter. SOURCE Human papillomavirus DNA. ORGANISM Human papillomavirus Viridae; ds-DNA nonenveloped viruses; Papovaviridae; Papillomavirus. REFERENCE 1 (bases 1 to 1038) AUTHORS Ensser,A. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Ensser,A. and Pfister,H. TITLE Epidermodysplasia verruciformis associated human papillomaviruses present a subgenus-specific organisation of the regulatory genome region JOURNAL Nucleic Acids Res. 18, 3919-3922 (1990) STANDARD full staff_review COMMENT *source: strain=HPV type 20. See -. From EMBL entry HPVLCR3; dated 13-JUL-1990. FEATURES Location/Qualifiers misc_feature 251..262 /note="E2-binding site (E2-BS)" misc_feature 320..322 /note="ORF L1 transcription stop" misc_feature 328..339 /note="E2-binding site (E2-BS)" misc_feature 388..394 /note="AP1 binding site" misc_feature 610..621 /note="E2-binding site (E2-BS)" promoter 670..688 /note="CAAT box" misc_feature 817..819 /note="ORF E6 transcription start" BASE COUNT 331 a 202 c 204 g 301 t ORIGIN 1 gaattcaaat atattagagg agtggcagtt aggatttgtt cctgcaccag ataatcctat 61 ccacgataca tacagatata ttaattctgc agctactaga tgtcctgaca aaaatcctcc 121 aaaagaaaga gaagatcctt acaaggatct aaacttttgg aatgttgacc tatcagaaag 181 attgtcctta gaattggatc aatattctct aggactcaaa ttcttatttc aagcaggttt 241 acaacaggcg accgtaaacg gtacaaaaac tgtatcttca aggttatcta ctaggggcgt 301 caaacgaaaa cgcaaaaatt aaactcgacc gttttcggta caataaagtc aacttttaca 361 cggtattcaa ggaatgttta tttactctga ctaactaaga taccaaccgc acccgacaca 421 taaaggtgag ttgtgtgcca aatgaggtga gttgtgagcc agaagagatc acagccaagt 481 caggcttgag ccaaatcaga tacactgcgt gccagagttg gctcaagctt catcgtccca 541 acacgttcgg aacaggagga aatgtaaggc tgccaacgct tttggctctt ctttttggca 601 cagcagaaga ccgttaacgg taagttttta tttgtatcgg gcgcggtcgt acattactca 661 tttggtagtt gttgttgcca gctaccatca agcatagcat gtttttgcct gtaacgttat 721 cggcacagtg attaatatat atatatatat atatatatat atatatatat atatatatat 781 ataaatagat acatatagac agatatcata gagctaatgc agagagtgca ggctcatggc 841 tacacctcct tcttcagaag acagcgctga tgaaggacca tccaatattg gagagacaaa 901 accttttatt ctagagccac cattgcctgc aacaatctgt ggcctagcga accttttaga 961 aataccgcta gatgattgtt tgataccttg taacttctgc ggtaattttc ttacacattt 1021 agaagtttgt gagtttga //