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From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Human papillomavirus (HPV) long control region
Message-ID: <May.28.11.42.38.1991.8166@genbank.bio.net>
Date: 28 May 91 18:42:38 GMT
Sender: will@genbank.bio.net
Distribution: bionet
Lines: 63
Approved: lear@genbank.bio.net
Checksum: 37970     4

LOCUS       PPHVLCR4      962 bp ds-DNA             VRL       28-MAY-1991
DEFINITION  Human papillomavirus (HPV) long control region
ACCESSION   X52061
KEYWORDS    E2-dependent enhancer; long control region; promoter.
SOURCE      Human papillomavirus DNA.
  ORGANISM  Human papillomavirus
            Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
            Papillomavirus.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Ensser,A.
  JOURNAL   Unpublished (1990)
  STANDARD  full automatic
REFERENCE   2  (sites)
  AUTHORS   Ensser,A. and Pfister,H.
  TITLE     Epidermodysplasia verruciformis associated human papillomaviruses
            present a subgenus-specific organisation of the regulatory genome
            region
  JOURNAL   Nucleic Acids Res. 18, 3919-3922 (1990)
  STANDARD  full staff_review
COMMENT     *source: strain=HPV type 36. See <X52059>-<X52062>.
            
            From EMBL    entry HPVLCR4;  dated 13-JUL-1990.
FEATURES             Location/Qualifiers
     misc_feature    251..262
                     /note="E2-binding site (E2-BS)"
     misc_feature    320..322
                     /note="ORF L1 transcription stop"
     misc_feature    327..338
                     /note="E2-binding site (E2-BS)"
     misc_feature    387..393
                     /note="AP1 binding site"
     misc_feature    417..428
                     /note="E2-binding site (E2-BS)"
     misc_feature    499..510
                     /note="E2-binding site (E2-BS)"
     misc_feature    594..605
                     /note="E2-binding site (E2-BS)"
     misc_feature    624..635
                     /note="E2-binding site (E2-BS)"
     promoter        658..676
                     /note="CAAT box"
     misc_feature    803..805
                     /note="ORF E6 transcription start"
BASE COUNT      299 a    178 c    191 g    294 t
ORIGIN
        1 gaattcttct ttattggaag attggcagtt aggttttgta cctactccag ataaccctat
       61 tcaagacacc tatcgatata ttgattcatt agccactcgc tgtcctgata aaaccccccc
      121 taaggaaaaa gaggatccct acaaggggtt aaagttctgg gatgtggatc ttactgaacg
      181 gttgtcacta gatttggatc aatactcttt aggtagaaag tttctatttc aagccggctt
      241 acagcagacg accgtaagcg gtacaaaatc agtgtcttat cgagggttca ccagaggaac
      301 caagcgcaag cgaaaacagt aatatgaccg tttttggtac agatttataa acttttacac
      361 agtattcaag gaatgtttgt ttactctgac taagtataac tctaccaagg gaaccgaccg
      421 cacccggtac agtcaacgat actgctgcca atatagactc tgtttagtgc cagaacatat
      481 catcttggaa gcagatcgac cgtgttcgtt gtaacacgct cggattagag acattgccaa
      541 ggaagattta atctacaatc gctgttggca atcgcttttg gctgagatag ctgaccggta
      601 acggtaagtt atttaattta tgtaccaggt gcggtactgg aatttcacaa taataattgt
      661 tgttgccaac taccattgct atattcaagt ttttgcctgt atcgttttcg tatcatgtga
      721 ataatatact gtatagtata aataaataaa taaatatata tatatatgct tcaaaggttg
      781 ggttttttaa taattaaggc aaatggcaga gcaagcctcc gaacagcaga atattacaga
      841 aaaagaaaaa gaacagctgc ctttaactat taagggcctg tcagaatcat taggcattcc
      901 gtttgtagac tgtctaatac cttgtaactt ttgtggcaaa tttttagatt atttagaagc
      961 tt
//