Path: utzoo!utgpu!news-server.csri.toronto.edu!bonnie.concordia.ca!uunet!bionet!will From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Tomato black ring virus (TBRV-L) satellite RNA Message-ID: Date: 28 May 91 18:42:50 GMT Sender: will@genbank.bio.net Distribution: bionet Lines: 65 Approved: lear@genbank.bio.net Checksum: 29570 4 LOCUS TBRTBRVLS 1376 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Tomato black ring virus (TBRV-L) satellite RNA ACCESSION X05687 KEYWORDS satellite RNA. SOURCE Tomato black ring virus RNA. ORGANISM Tomato black ring virus Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses; Nepovirus. REFERENCE 1 (bases 1 to 1376) AUTHORS Hemmer,O., Meyer,M., Greif,C. and Fritsch,C. TITLE Comparison of the Nucleotide Sequences of Five Tomato Black Ring Virus Satellite RNAs JOURNAL J. Gen. Virol. 68, 1823-1833 (1987) STANDARD full automatic REFERENCE 2 (bases 1 to 1376) AUTHORS Fritsch,C. JOURNAL Unpublished (1988) STANDARD full automatic COMMENT *source: strain=L serotype; Data kindly reviewed (15-FEB-1988) by Fritsch C. From EMBL entry NCTBRVLS; dated 06-JUL-1989. FEATURES Location/Qualifiers misc_feature 15..17 /note="initiation codon" old_sequence 150..150 /note="u was c in [1]" /citation=[1] misc_feature 1287..1289 /note="in-phase termination codon" misc_feature 1302..1362 /note="pot.stem-loop structure" repeat_unit 1302..1327 /note="imp.inverted repeat A" misc_feature 1311..1313 /note="in-phase termination codon" repeat_unit 1341..1362 /note="imp.inverted repeat A'" BASE COUNT 385 a 326 c 325 g 340 t ORIGIN 1 ttgaaaaaat acagatgaag tcttattttt gtgtaacccc aacaggttgt cttaagactc 61 atactcgacc acgaatagtt cctaagcatt caaagaaatg cctaaggacc tattctcggc 121 cacgctccag cctttctgac tcggaaggct ggtgtgtggt gctcccccgt gacggggggg 181 gccgtaagcg caaggcagac ggtagccagg gccgtccttc aaacaatccc ggtcgtccga 241 gcaggaaatg gacggaaaaa acaattgctg ctcccccgca gggcttcttc agcaggaggg 301 acaatgggta ctgggttccc aagtctccgg agaagaagta tgttccgaag aatcttccta 361 ggaacatgga tggcaagaaa acctataagg atgccttgac ctcccctgcg aaaatccaaa 421 tcaaacccac ccctgaaagt attcttttgg ctcaaaagat acaaaattca accttcaaat 481 ctaggggaaa agtgacactg agccaaactt ctttaccact cgtcaaccgg tttcaggaac 541 tccaattgaa tactcttttg gaacctgttg aagagtccac acccttcggg gttaacgata 601 aacgagcgca acaccttttt tgtaaaaagg tggaacgcaa ggttggacgc acaacaatgt 661 tggtgtgtcc aattacaggt actgagtccc acatagacgt taaacgtggg attagtgcca 721 gaatcgtgga ctccatggcc tcggtagtgc ataccgataa acttcccgaa tatgaacggg 781 gccatgttgt gataaagaac gtctcacgta ccaagagggt atgtacgcca gttcctttca 841 tcggaacttt tagtgatcgc gcaattagag ttgaatgcga cgatcatacc gatgaactgg 901 cctctgcatc tagtgtccct tccatttgga agccctcaaa gaaacagcat gctgtcccca 961 tttcatcttc taatgaaatg ggttcagcag taggcacgaa accggactgg tacactccgg 1021 ttaagacttg cactcatcgc caatatcaga aagtgcagcg tgtcttcctt gacgccatga 1081 acataatgcg taccttgcgt ttccatatag gaccgcgaga acttcgagaa acatgggtca 1141 agtgctggct acaggtccac aaaaagaatg tggcattccc gggttggatg ataactccgt 1201 tattgtctgg cactgtgcct tgtgcacaag aatttttcct gcctttggca ggggaaaacc 1261 gggggtttgt cacagtttgt caagcctaga gacctgtagg gtggagtttt taaaggtaca 1321 tgatcattca tgtgaaatat aagattgtat accttttctc cagagcaaat aaatct //