Path: utzoo!utgpu!news-server.csri.toronto.edu!bonnie.concordia.ca!uunet!stanford.edu!agate!bionet!will From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Cauliflower mosaic virus (CM4184) R, U5 and flanking regions Message-ID: Date: 28 May 91 18:40:35 GMT Sender: will@genbank.bio.net Distribution: bionet Lines: 71 Approved: lear@genbank.bio.net Checksum: 27027 5 LOCUS MCACM4184 2539 bp ds-DNA VRL 28-MAY-1991 DEFINITION Cauliflower mosaic virus (CM4184) R, U5 and flanking regions ACCESSION X02606 KEYWORDS long terminal repeat. SOURCE Cauliflower mosaic virus DNA. ORGANISM Cauliflower mosaic virus Viridae; ds-DNA nonenveloped viruses; Caulimovirus. REFERENCE 1 (bases 1 to 2539; 1 to 2539) AUTHORS Dixon,L., Nyffenegger,T., Delley,G. and Hohn,T. JOURNAL Unpublished (1986) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Dixon,L., Nyffenegger,T., Delley,G., Martinez-Izquierdo,J. and Hohn,T. TITLE Evidence for replicative recombination in cauliflower mosaic virus JOURNAL Virology 150, 463-468 (1986) STANDARD full staff_review COMMENT From EMBL entry CACM4184; dated 02-JUL-1986. FEATURES Location/Qualifiers misc_feature <1..428 /note="sequence corresponding to U3 region fragment" misc_feature 429..625 /note="sequence corresponding to R region" misc_feature 626..1028 /note="sequence corresponding to U5 region" BASE COUNT 905 a 495 c 474 g 665 t ORIGIN 1 aaaatcttcg tcaacatggt ggagcacgac actctcgtct actccaagaa tatcaaagat 61 acagtctcag aagaccaaag ggctattgag acgtttcaac aaagggtaat atcgggaaac 121 ctcctcggat tccattgccc agctatctgt cacttcatca aaaggacagt agaaaaggaa 181 ggtggcacct acaaatgcca tcattgcgat aaaggaaagg ctatcattca agatgcctct 241 gccgacagtg gtcccaaaga tggaccccca cccacgagga gcatcgtgga aaaagaagac 301 gttccaacca cgtcttcaaa gcaagtggat tgatgtgata tctccactga cgtaagggaa 361 tgacgcacaa tcccactatc cttcgcaaga cccttcctct atataaggaa gttcatttca 421 tttggagagg acacgctgaa atcaccagtc tctctctaca aatctatctc tctctatttt 481 ctccataata atgtgtgagt agttcccaga taagggaatt agggttctta tagggtttcg 541 ctcatgtgtt gagcatataa gaaaccctta gtatgtattt gtatttgtaa aatacttcta 601 tcaataaaat ttctaattcc taaaaccaaa atccagtact aaaatccaga tctcctaaag 661 tcccaataga tctttgtggt gaatataaac cagacacgag acgactaaac ctggagccca 721 gatgccgctt gaagctagaa gtaccgctta ggcaggaggc cgttagggaa aagatgctaa 781 ggcagggttg gttacgttga ctcccccgta ggtttggttt aaatatcatg aagtggacgg 841 aaggaaggag gaagacatgg aaggataagg ttgcaggccc tgtgcaaggt aagacgatgg 901 aaatttgata gaggtacgtt actatactta tactatacgc taagggaatg cttgtattta 961 ccctatatac cctagtaacc ccttatcgat ttaaagaaat aatccgcata agcccccgct 1021 taaaaaattg gtatcagagc catgaatcgg tttaaaaacc aaactcaaga gggtaaaacc 1081 tcaccaaaat acgaaagagt tcttaactct aaagataaaa gatctttcaa gatcaaaact 1141 agttccctca caccggtgac cgacaggttt accaccgtaa ggtttcagaa caacatcgaa 1201 tgcgtttacg ccaacttcga ctctcagctc aagtcgtcgt acgatggtag atctaaaaag 1261 atcaagaatc taagccttaa aaatcttaga tgttatgaag ccttcctcag gaagtacctt 1321 ctggaacaat aaatctctct gagaatagta ctctaacgag tatccacagg aaaaataatc 1381 ttctgtgttg agatggattt gtatccagaa gaaaataccc aaagcgagca atcgcagaat 1441 tctgaaaata atatgcaaat atttaagtca gaaaattcgg atggattctc ctccgatcta 1501 atgatctcaa acgatcaatt aaaaaatatc tctaagaccc aattaacttt ggagaaagaa 1561 aagatattca aaatgcctaa cgttttatct caagttatga aaaaagcgtt tagcaggaaa 1621 aacgagattc tttactgcgt ctcgacaaaa gaattatcag tggacattca cgatgccaca 1681 ggtaaggtat atctcccttt aatcactaga gaggagataa ataaaagact ttctagctta 1741 aaacctgaag tcagaaagat catgtccatg gttcatcttg gagcggtcaa aatattgctt 1801 aaagctcaat ttcgaaatgg gattgatacc ccaatcaaaa ttgctttaat cgatgataga 1861 attaattcta gaagagattg ccttctcggt gcagccaaag gtaatctagc atacggtaag 1921 tttatgttta ctgtataccc caagtttgga ataagcctta atacccaaag acttaaccaa 1981 accttaagtc ttattcatga ttttgagaat aaaaatctta tgaataaagg tgataaagtt 2041 atgaccataa cctatatcgt aggatatgca ttaactaata gtcatcatag catagattat 2101 caatcgaatg ctacaattga actagaagac gtatttcaag aaattggaaa tgtccagcaa 2161 tctgactttt gtacaataca aaatgacgaa tgcaattggg ccattgatat agcccaaaac 2221 aaagccttat taggagctaa aacccaatcc caaattggta atagtcttca aataggaaac 2281 agtgcttcat cctctaatac tgaaaatgaa ttagctaggg taagccaaaa catagatctt 2341 ttaaaaaaca aattaaaaga gatctgtgga gaataaaatg agcattacgg gtcaaccgca 2401 tgtttataaa aaggattaaa gaatattatt ggctgaaatg gctaatctta atcaaatcca 2461 gaaagaagtc tctgaaatcc tcagtgacca aaaatccatg aaatcggata taaaagctat 2521 cttagaattg ctaggatcc //