Path: utzoo!utgpu!news-server.csri.toronto.edu!bonnie.concordia.ca!uunet!stanford.edu!agate!bionet!will From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Cauliflower mosaic virus genome. Message-ID: Date: 28 May 91 18:40:37 GMT Sender: will@genbank.bio.net Distribution: bionet Lines: 185 Approved: lear@genbank.bio.net Checksum: 23809 13 LOCUS MCAMVG2 8024 bp ds-DNA VRL 28-MAY-1991 DEFINITION Cauliflower mosaic virus genome. ACCESSION V00141 KEYWORDS genome. SOURCE Cauliflower mosaic virus DNA. ORGANISM Cauliflower mosaic virus Viridae; ds-DNA nonenveloped viruses; Caulimovirus. REFERENCE 1 (bases 1 to 8024) AUTHORS Franck,A., Guilley,H., Jonard,G., Richards,K. and Hirth,L. TITLE Nucleotide sequence of cauliflower mosaic virus DNA JOURNAL Cell 21, 285-294 (1980) STANDARD full automatic COMMENT EPD; 07015; CaMV 8s,35s major. EPD; 07016; CaMV 35s minor. SWISS-PROT; P03542; COAT$CAMVS. SWISS-PROT; P03545; Y1$CAMVS. SWISS-PROT; P03548; Y2$CAMVS. SWISS-PROT; P03551; Y3$CAMVS. SWISS-PROT; P03554; POL$CAMVS. SWISS-PROT; P03559; IBMP$CAMVS. KST CAULIFLOWER From EMBL entry CAMVG2; dated 06-JUL-1989. FEATURES Location/Qualifiers CDS 364..1344 /note="reading frame (I)" /codon_start=364 CDS 1349..1825 /note="reading frame (II)" /codon_start=1349 misc_feature 1628..1628 /note="single-stranded gap (gap3)" CDS 1830..2216 /note="reading frame (III)" /codon_start=1830 CDS 2201..3667 /note="reading frame (IV)" /codon_start=2201 CDS 3633..5669 /note="reading frame (V)" /codon_start=3633 misc_feature 4210..4210 /note="single-stranded gap (gap2)" CDS 5776..7335 /note="reading frame (VI)" /codon_start=5776 modified_base complement(6658..6658) /mod_base=other /note="modified D-C residue" misc_feature complement(8024..8024) /note="single-stranded gap (gap1)" BASE COUNT 2946 a 1649 c 1558 g 1871 t ORIGIN 1 ggtatcagag ccatgaatcg gtttaagacc aaaactcaag agggtaaaac ctcaccaaaa 61 tacgaaagag ttcttaactc taaaaataaa agatctttca agatcaaaca tagttccctc 121 acaccggtga ccgacaggat taccaccgta aggtttcaga acaacatcga aagcgtttac 181 gccaacttcg actctcaact caagtcgtcg tacgatggta gatctaaaaa gatcaagact 241 ctaagcctta aaaatcttag atgttacgaa gccttcctca ggaagtacct tctggaacaa 301 taaatctctc tgagaatagt actctattga gtatccacag gaaaaataac cttctgtgtt 361 gagatggatt tgtatccaga agaaaatacc caaagcgagc aatcgcagaa ttctgaaaat 421 aatatgcaaa tatttaaatc agaaaattcg gatggattct cctccgatct aatgatctca 481 aacgatcaat taaaaaatat ctctaaaacc caattaacct tggagaaaga aaagatattt 541 aaaatgccta acgttttatc tcaagttatg aaaaaagcgt ttagcaggaa aaacgagatt 601 ctctactgcg tctcgacaaa agaattatca gtggacattc acgatgccac aggtaaggta 661 tatcttccct taatcactaa ggaagagata aataaaagac tttccagctt aaaacctgaa 721 gtcagaaaga ccatgtccat ggttcatctt ggagcggtca aaatattgct taaagctcaa 781 tttcgaaatg ggattgatac cccaatcaaa attgctttaa tcgatgatag aatcaattct 841 agaagagatt gtcttcttgg tgcagccaaa ggtaatctag catacggtaa gtttatgttt 901 actgtatacc ctaagtttgg aataagcctt aacacccaaa gacttaacca aaccctaagc 961 cttattcatg attttgaaaa taaaaatctt atgaataaag gtgataaagt tatgaccata 1021 acctatgtcg taggatatgc attaactaat agtcatcata gcatagatta tcaatcaaat 1081 gctacaattg aactagaaga cgtatttcaa gaaattggaa atgtccagca atctgagttc 1141 tgtacaatac agaatgatga atgcaattgg gccattgata tagcccaaaa caaagcctta 1201 ttaggagcta aaaccaagac tcaaattggt aataaccttc aaataggtaa cagtgcttca 1261 tcctctaata ctgaaaatga attagctagg gtaagccaga acatagatct tttaaagaat 1321 aaattaaaag aaatctgtgg agaataatat gagcattacg ggacaaccgc atgtttataa 1381 aaaagatact attattagac taaaaccatt gtctcttaat agtaataata gaagttatgt 1441 ttttagttcc tcaaaaggga acattcaaaa tataattaat catcttaaca acctcaatga 1501 gattgtagga agaagcttac tcggaatatg gaagatcaac tcatacttcg gattaagcaa 1561 agacccttcg gagtccaaat caaaaaaccc gtcagttttt aatactgcaa aaaccatttt 1621 taagagtggg ggggttgatt actcgagcca actaaaggaa ataaaatccc ttttagaagc 1681 tcaaaacact agaataaaaa gtctagaaaa agcaattcaa tccttagaaa ataagattga 1741 accagagccc ttaactaaag aggaagttaa agagctaaaa gaatcgatta actcgatcaa 1801 agaaggatta aagaatatta ttggctaaaa tggctaatct taatcagatc caaaaagaag 1861 tctctgaaat cctcagtgac caaaaatcca tgaaagcgga tataaaagct atcttagaat 1921 tattaggatc ccaaaatcct attaaagaaa gcttagaaac cgttgcagca aaaatcgtta 1981 atgacttaac caagctcatc aatgattgtc cttgtaacaa agagatatta gaagccttag 2041 gtacccaacc taaagagcaa ctaatagaac aacctaaaga aaaaggtaaa ggccttaact 2101 taggaaaata ctcttacccc aattacggag taggaaatga agaattagga tcctctggaa 2161 accctaaagc tttaacctgg cccttcaaag ctccagcagg atggccgaat caattttaga 2221 cagaaccatt aataggtttt ggtataatct gggagaagat tgtctctcag aaagtcaatt 2281 cgatcttatg ataagattga tggaagagtc ccttgacggg gaccaaatta ttgatctaac 2341 ctctctacct agtgataatt tgcaggttga acaggttatg acaactaccg aagactcaat 2401 ctcggaagaa gaatcagaat tccttctagc aataggagaa acatctgaag aagaaagcga 2461 ttcaggagaa gaacctgaat tcgagcaagt tcgaatggat cgaacaggag gaacggagat 2521 tccaaaagaa gaagatggtg aaggaccatc tagatacaat gagagaaaga gaaagacccc 2581 ggaggaccgg tactttccaa ctcaaccaaa gaccattcca ggacaaaagc aaacgtctat 2641 gggaatgctc aacattgact gccaaaccaa tcgaagaact ctaatcgacg actgggcagc 2701 agaaatcgga ttgatagtca agaccaatag agaagactat ctcgatccag aaacaattct 2761 actcttgatg gaacacaaaa catcaggaat agccaaggag ttaatccgaa atacaagatg 2821 gaaccgcact accggagaca tcatagaaca ggtgatcgat gcgatgtaca ccatgttctt 2881 aggactaaac tactccgaca acaaagttgc tgagaagatt gacgagcaag agaaggccaa 2941 gatcagaatg accaagctcc agctctgcga catctgctac cttgaggaat ttacatgtga 3001 ttatgaaaag aacatgtata agacagaact ggcggatttc ccaggatata tcaaccagta 3061 cctgtcaaaa atccccatca ttggagaaaa agcgttaaca cgctttaggc atgaagctaa 3121 cggaaccagc atctacagtt taggtttcgc ggcaaagata gtcaaagaag aactatctaa 3181 aatctgcgac ttatccaaga agcagaagaa gttgaagaaa ttcaacaaga agtgttgtag 3241 catcggagaa gcttcaacag aatatggatg caagaagaca tccacaaaga agtatcacaa 3301 gaagcgatac aagaaaaaat ataaggctta caaaccttat aagaagaaaa agaagttccg 3361 atcaggaaaa tacttcaagc ccaaagaaaa gaagggctca aagcaaaagt attgcccaaa 3421 aggcaagaaa gattgcagat gttggatctg caacattgaa ggccattacg ccaacgaatg 3481 tcctaatcga caaagctcgg agaaggctca catccttcaa caagcagaaa aattgggtct 3541 ccagcccatt gaagaaccct atgaaggagt tcaagaagta ttcattctag aatacaaaga 3601 agaggaagaa gaaacctcta cagaagaaag tgatggatca tctacttctg aagactcaga 3661 ctcagactga gcaggtgatg aacgtcacca atcccaattc gatctacatc aagggaagac 3721 tctacttcaa gggatacaag aagatagaac ttcactgttt cgtagacacg ggagcaagcc 3781 tatgcatagc atccaagttc gtcataccag aagaacattg ggtcaatgca gaaagaccaa 3841 ttatggtcaa aatagcagat ggaagctcaa tcaccatcag caaagtctgc aaagacatag 3901 acttgatcat agccggcgag atattcagaa ttcccaccgt ctatcagcaa gaaagtggca 3961 tcgatttcat tatcggcaac aacttctgtc agctgtatga accattcata cagtttacgg 4021 atagagttat cttcacaaag aacaagtctt atcctgttca tattgcgaag ctaaccagag 4081 cagtgcgagt aggcaccgaa ggatttcttg aatcaatgaa gaaacgttca aaaactcaac 4141 aaccagagcc agtgaacatt tctacaaaca agatagaaaa tccactagaa gaaattgcta 4201 ttctttcaga ggggaggagg ttatcagaag aaaaactctt tatcactcaa caaagaatgc 4261 aaaaaatcga agaactactt gagaaagtat gttcagaaaa tccattagat cctaacaaga 4321 ctaagcaatg gatgaaagct tctatcaagc tcagcgaccc aagcaaagct atcaaggtta 4381 aacccatgaa gtatagccca atggatcgcg aagaatttga caagcaaatc aaagaattac 4441 tggacctaaa agtcatcaag cccagtaaaa gccctcacat ggcaccagcc ttcttggtca 4501 acaatgaagc cgagaagcga agaggaaaga aacgtatggt agtcaactac aaagctatga 4561 acaaagctac tgtaggagat gcctacaatc ttcccaacaa agacgagtta cttacactca 4621 ttcgaggaaa gaagatcttc tcttccttcg actgtaagtc aggattctgg caagttctgc 4681 tagatcaaga atcaagacct ctaacggcat tcacatgtcc acaaggtcac tacgaatgga 4741 atgtggtccc tttcggctta aagcaagctc catccatatt ccaaagacac atggacgaag 4801 catttcgtgt gttcagaaag ttctgttgcg tttatgtcga cgacattctc gtattcagta 4861 acaacgaaga agatcatcta cttcacgtag caatgatctt acaaaagtgt aatcaacatg 4921 gaattatcct ttccaagaag aaagcacaac tcttcaagaa gaagataaac ttccttggtc 4981 tagaaataga tgaaggaaca cataagcctc aaggacatat cttggaacac atcaacaagt 5041 tccccgatac ccttgaagac aagaagcaac ttcagagatt cttaggcata ctaacatatg 5101 cctcggatta catcccgaag ctagctcaaa tcagaaagcc tctgcaagcc aagcttaaag 5161 aaaacgttcc atggagatgg acaaaagagg ataccctcta catgcaaaag gtgaagaaaa 5221 atctgcaagg atttcctcca ctacatcatc ccttaccaga ggagaagctg atcatcgaga 5281 ccgatgcatc agacgactac tggggaggta tgttaaaagc tatcaaaatt aacgaaggta 5341 ctaatactga gttaatttgc agatacgcat ctggaagctt taaagctgca gaaaagaatt 5401 accacagcaa tgacaaagag acattggcgg taataaatac tataaagaaa tttagtattt 5461 atctaactcc tgttcatttt ctgattagga cagataatac tcatttcaag agtttcgtta 5521 atctcaatta caaaggagat tcgaaacttg gaagaaacat cagatggcaa gcatggctta 5581 gccactattc atttgatgtt gaacacatta aaggaaccga caaccacttt gcggacttcc 5641 tttcaagaga attcaataag gttaattcct aattgaaatc cgaagataag attcccacac 5701 acttgtggct gatatcaaaa ggctactgcc tatttaaaca catctctgga gactgagaaa 5761 atcagacctc caagcatgga gaacatagaa aaactcctca tgcaagagaa aatactaatg 5821 ctagagctcg atctagtaag agcaaaaata agcttagcaa gagctaacgg ctcttcgcaa 5881 caaggagacc tctctctcca ccgtgaaaca ccggaaaaag aagaagcagt tcattctgca 5941 ctggctactt ttacgccatc tcaagtaaaa gctattccag agcaaacggc tcctggtaaa 6001 gaatcaacaa atccgttgat ggctaatatc ttgccaaaag atatgaattc agttcagact 6061 gaaattaggc ccgtaaagcc atcggacttc ttacgtccac atcagggaat tccaatccca 6121 ccaaaacctg aacctagcag ttcagttgct cctctcagag acgaatcggg tattcaacac 6181 cctcatacca actactacgt cgtgtataac ggacctcatg ccggtatata cgatgactgg 6241 ggttgtacaa aggcagcaac aaacggtgtt cccggagttg cgcataagaa gtttgccact 6301 attacagagg caagagcagc agctgacgcg tatacaacaa gtcagcaaac agataggttg 6361 aacttcatcc ccaaaggaga agctcaactc aagcccaaga gctttgcgaa ggccttaaca 6421 agcccaccaa agcaaaaagc ccactggctc atgctaggaa ctaaaaagcc cagcagtgat 6481 ccagccccaa aagagatctc ctttgcccca gagatcacaa tggacgactt cctctatctc 6541 tacgatctag tcaggaagtt cgacggagaa ggtgacgata ccatgttcac cactgataat 6601 gagaagatta gccttttcaa tttcagaaag aatgctaacc cacagatggt tagagaggct 6661 tacgcagcag gtctcatcaa gacgatctac ccgagcaata atctccagga gatcaaatac 6721 cttcccaaga aggttaaaga tgcagtcaaa agattcagga ctaactgcat caagaacaca 6781 gagaaagata tatttctcaa gatcagaagt actattccag tatggacgat tcaaggcttg 6841 cttcacaaac caaggcaagt aatagagatt ggagtctcta aaaaggtagt tcccactgaa 6901 tcaaaggcca tggagtcaaa gattcaaata gaggacctaa cagaactcgc cgtaaagact 6961 ggcgaacagt tcatacagag tctcttacga ctcaatgaca agaagaaaat cttcgtcaac 7021 atggtggagc acgacacgct tgtctactcc aaaaatatca aagatacagt ctcagaagac 7081 caaagggcaa ttgagacttt tcaacaaagg gtaatatccg gaaacctcct cggattccat 7141 tgcccagcta tctgtcactt tattgtgaag atagtggaaa aggaaggtgg ctcctacaaa 7201 tgccatcatt gcgataaagg aaaggccatc gttgaagatg cctctgccga cagtggtccc 7261 aaagatggac ccccacccac gaggagcatc gtggaaaaag aagacgttcc aaccacgtct 7321 tcaaagcaag tggattgatg tgatatctcc actgacgtaa gggatgacgc acaatcccac 7381 tatccttcgc aagacccttc ctctatataa ggaagttcat ttcatttgga gaggacacgc 7441 tgaaatcacc agtctctctc tacaaatcta tctctctcta taataatgtg tgagtagttc 7501 ccagataagg gaattagggt tcttataggg tttcgctcat gtgttgagca tataagaaac 7561 ccttagtatg tatttgtatt tgtaaaatac ttctatcaat aaaatttcta attcctaaaa 7621 ccaaaatcca gtactaaaat ccagatctcc taaagtccct atagatcttt gtggtgaata 7681 taaaccagac acgagacgac taaacctgga gcccagacgc cgtttgaagc tagaagtacc 7741 gcttaggcag gaggccgtta gggaaaagat gctaaggcag ggttggttac gttgactccc 7801 ccgtaggttt ggtttaaata tcatgaagtg gacggaagga aggaggaaga caaggaagga 7861 taaggttgca ggccctgtgc aaggtaagac gatggaaatt tgatagaggt acgttactat 7921 acttatacta tacgctaagg gaatgcttgt atttacccta tataccctaa tgacccctta 7981 tcgatttaaa gaaataatcc gcataagccc ccgcttaaaa aatt //