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From: GenBank-Updates@genbank.bio.net
Newsgroups: bionet.molbio.genbank.updates
Subject: Rat (Novikoff hepatoma) U2 small nuclear RNA
Message-ID: <May.28.11.54.18.1991.10903@genbank.bio.net>
Date: 28 May 91 18:54:19 GMT
Sender: will@genbank.bio.net
Distribution: bionet
Lines: 85
Approved: lear@genbank.bio.net
Checksum: 43656     4

LOCUS       RATU2RNA      187 bp ss-mRNA            ROD       28-MAY-1991
DEFINITION  Rat (Novikoff hepatoma) U2 small nuclear RNA
ACCESSION   X04212
KEYWORDS    U2 small nuclear RNA; small nuclear RNA.
SOURCE      Rattus norvegicus RNA.
  ORGANISM  Rattus norvegicus
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE   1  (bases 1 to 187)
  AUTHORS   Reddy,R., Henning,D., Epstein,P. and Busch,H.
  TITLE     Primary and secondary structure of U2 snRNA
  JOURNAL   Nucleic Acids Res. 9, 5645-5658 (1981)
  STANDARD  full automatic
COMMENT     From EMBL    entry RNU2RNA;  dated 24-APR-1990.
FEATURES             Location/Qualifiers
     misc_feature    1..187
                     /note="U2 small nuclear RNA"
     misc_feature    1..1
                     /note="2'-0-methyladenosine"
     modified_base   2..2
                     /mod_base=um
                     /note="2'-O-methyluridine"
     modified_base   6..6
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   7..7
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   11..11
                     /mod_base=gm
                     /note="2'-O-methylguanosine"
     modified_base   12..12
                     /mod_base=gm
                     /note="2'-O-methylguanosine"
     modified_base   15..15
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   19..19
                     /mod_base=gm
                     /note="2'-O-methylguanosine"
     modified_base   25..25
                     /mod_base=gm
                     /note="2'-O-methylguanosine"
     misc_feature    30..30
                     /note="2'-O-methyladenosine"
     modified_base   34..34
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   37..37
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   39..39
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   41..41
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   43..43
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   44..44
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   47..47
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   54..54
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   58..58
                     /mod_base=p
                     /note="pseudouridine"
     modified_base   61..61
                     /mod_base=other
                     /note="2'O-methylcytidine"
     modified_base   91..91
                     /mod_base=p
                     /note="pseudouridine"
BASE COUNT       45 a     43 c     41 g     58 t
ORIGIN
        1 atcgcttctc ggccttttgg ctaagatcaa gtgtagtatc tgttcttatc agtttaatat
       61 ctgatacgtc ctctatccga ggacaatata ttaaatggat ttttggaact aggagttgga
      121 ataggagctt gctccgtcca ctccacgcat cgacctggta ttgcagtacc tccaggaacg
      181 gtgcacc
//