Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!spool.mu.edu!agate!bionet!will From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Tobacco mosaic virus genome (variant 2) Message-ID: Date: 28 May 91 18:56:51 GMT Article-I.D.: genbank.May.28.11.56.50.1991.11240 Sender: will@genbank.bio.net Distribution: bionet Lines: 128 Approved: lear@genbank.bio.net Checksum: 46409 9 LOCUS MTVTMV5 6398 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Tobacco mosaic virus genome (variant 2) ACCESSION V01409 KEYWORDS coat protein; genome. SOURCE Tobacco mosaic virus RNA. ORGANISM Tobacco mosaic virus Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses; Tobamovirus. REFERENCE 1 (bases 1 to 6398) AUTHORS Goelet,P., Lomonossoff,G.P., Butler,P.J., Akam,M.E., Gait,M.J. and Karn,J. TITLE Nucleotide sequence of tobacco mosaic virus RNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 79, 5818-5822 (1982) STANDARD full automatic COMMENT SWISS-PROT; P03570; COAT$TMV. SWISS-PROT; P03583; V30K$TMV. SWISS-PROT; P03586; V180$TMV. From EMBL entry TOTMV5; dated 13-JUL-1983. BASE COUNT 1859 a 1228 c 1547 g 1764 t ORIGIN 1 gtatttttac aacaattacc aacaacaaca acaaacaaca acaacattac attttacatt 61 ctacaactac aatggcatac acacaaacag ccacatcgtc cgctttgctt gagaccgtcc 121 gaggtaacaa taccttggtc aacgatcttg caaagcggcg tctatatgac acagcggtcg 181 atgaatttaa tgctagggac cgcaggccta aagttaattt ttccaaagta ataagcgagg 241 agcagacgct tattgctacc cgggcgtatc cagaattcca aattacattt tataacacgc 301 aaaatgccgt gcattcgctt gcaggtggat tgcgatcttt agaactggaa tatctgatga 361 tgcaaattcc ctacggatca ttgacttatg acataggcgg gaattttgca tcgcatctgt 421 tcaagggacg agcatatgta cactgctgca tgcccaacct ggacgttcga gacatcatgc 481 ggcacgaagg ccagaaagac agtattgaac tatacctttc taggctagag agagggggga 541 aaacagtccc caacttccaa aaggaagcat ttgacagata cgcagaaatt cctgaagacg 601 ctgtctgtca caatactttc cagacaatgc gacatcagcc gatgcagcaa tcaggcagag 661 tgtatgccat tgcgctacac agcatatatg acataccagc cgatgagttc ggggcggcac 721 tcttgaggaa aaatgtccat acgtgctatg ccgctttcca cttctctgag aacctgcttc 781 ttgaagattc atacgtcaat ttggacgaaa tcaacgcgtg tttttcgcgc gatggagaca 841 agttgacctt ttcttttgca tcagagagta ctcttaatta ttgtcatagt tattctaata 901 ttcttaagta tgtgtgcaaa acttacttcc cggcctctaa tagagaggtt tacatgaagg 961 agtttttagt caccagagtt aatacctggt tttgtaagtt ttctagaata gatacttttc 1021 ttttgtacaa aggtgtggcc cataaaagtg tagatagtga gcagttttat actgcaatgg 1081 aagacgcatg gcattacaaa aagactcttg caatgtgcaa cagcgagaga atcctccttg 1141 aggattcatc atcagtcaat tactggtttc ccaaaatgag ggatatggtc atcgtaccat 1201 tattcgacat ttctttggag actagtaaga ggacgcgcaa ggaagtctta gtgtccaagg 1261 atttcgtgtt tacagtgctt aaccacattc gaacatacca ggcgaaagct cttacatacg 1321 caaatgtttt gtcctttgtc gaatcgattc gatcgagggt aatcattaac ggtgtgacag 1381 cgaggtccga atgggatgtg gacaaatctt tgttacaatc cttgtccatg acgttttacc 1441 tgcatactaa gcttgccgtt ctaaaggatg acttactgat tagcaagttt agtctcggtt 1501 cgaaaacggt gtgccagcat gtgtgggatg agatttcgct ggcgtttggg aacgcatttc 1561 cctccgtgaa agagaggctc ttgaacagga aacttatcag agtggcaggc gacgcattag 1621 agatcagggt gcctgatcta tatgtgacct tccacgacag attagtgact gagtacaagg 1681 cctctgtgga catgcctgcg cttgacatta ggaagaagat ggaagaaacg gaagtgatgt 1741 acaatgcact ttcagagtta tcggtgttaa gggagtctga caaattcgat gttgatgttt 1801 tttcccagat gtgccaatct ttggaagttg acccaatgac ggcagcgaag gttatagtcg 1861 cggtcatgag caatgagagc ggtctgactc tcacatttga acgacctact gaggcgaatg 1921 ttgcgctagc tttacaggat caagagaagg cttcagaagg tgctttggta gttacctcaa 1981 gagaagttga agaaccgtcc atgaagggtt cgatggccag aggagagtta caattagctg 2041 gtcttgctgg agatcatccg gagtcgtcct attctaagaa cgaggagata gagtctttag 2101 agcagtttca tatggcagcg gcagattcgt taattcgtaa gcagatgagc tcgattgtgt 2161 acacgggtcc gattaaagtt cagcaaatga aaaactttat cgatagcctg gtagcatcac 2221 tatctgctgc ggtgtcgaat ctcgtcaaga tcctcaaaga tacagctgct attgaccttg 2281 aaacccgtca aaagtttgga gtcttggatg ttgcatctag gaagtggtta atcaaaccaa 2341 cggccaagag tcatgcatgg ggtgttgttg aaacccacgc gaggaagtat catgtggcgc 2401 ttttggaata tgatgagcag ggtgtggtga catgcgatga ttggagaaga gtagctgtca 2461 gctctgagtc tgttgtttat tccgacatgg cgaaactcag aactctgcgc agactgcttc 2521 gaaacggaga accgcatgtc agtagcgcaa aggttgttct tgtggacgga gttccgggct 2581 gtggaaaaac caaagaaatt ctttccaggg ttaattttga tgaagatcta attttagtac 2641 ctgggaagca agccgcggaa atgatcagaa gacgtgcgaa ttcctcaggg attattgtgg 2701 ccacgaagga caacgttaaa accgttgatt ctttcatgat gaattttggg aaaagcacac 2761 gctgtcagtt caagaggtta ttcattgatg aagggttgat gttgcatact ggttgtgtta 2821 attttcttgt ggcgatgtca ttgtgcgaaa ttgcatatgt ttacggagac acacagcaga 2881 ttccatacat caatagagtt tcaggattcc cgtaccccgc ccattttgcc aaattggaag 2941 ttgacgaggt ggagacacgc agaactactc tccgttgtcc agccgatgtc acacattatc 3001 tgaacaggag atatgagggc tttgtcatga gcacttcttc ggttaaaaag tctgtttcgc 3061 aggagatggt cggcggagcc gccgtgatca atccgatctc aaaacccttg catggcaaga 3121 tcctgacttt tacccaatcg gataaagaag ctctgctttc aagagggtat tcagatgttc 3181 acactgtgca tgaagtgcaa ggcgagacat actctgatgt ttcactagtt aggttaaccc 3241 ctacaccagt ctccatcatt gcaggagaca gcccacatgt tttggtcgca ttgtcaaggc 3301 acacctgttc gctcaagtac tacactgttg ttatggatcc tttagttagt atcattagag 3361 atctagagaa acttagctcg tacttgttag atatgtataa ggtcgatgca ggaacacaat 3421 agcaattaca gattgactcg gtgttcaaag gttccaatct ttttgttgca gcgccaaaga 3481 ctggtgatat ttctgatatg cagttttact atgataagtg tctcccaggc aacagcacca 3541 tgatgaataa ttttgatgct gttaccatga ggttgactga catttcattg aatgtcaaag 3601 attgcatatt ggatatgtct aagtctgttg ctgcgcctaa ggatcaaatc aaaccactaa 3661 tacctatggt acgaacggcg gcagaaatgc cacgccagac tggactattg gaaaatttag 3721 tggcgatgat taaaaggaac tttaacgcac ccgagttgtc tggcatcatt gatattgaaa 3781 atactgcatc tttggttgta gataagtttt tcgatagtta tttgcttaaa gaaaaaagaa 3841 aaccaaataa aaatgtttct ttgttcagta gagagtctct caatagatgg ttagaaaagc 3901 aggaacaggt aacaataggc cagctcgcag attttgattt tgtggatttg ccagcagttg 3961 atcagtacag acacatgatc aaagcacaac ccaagcaaaa gttggacact tcaatccaaa 4021 cggagtaccc ggctttgcag acgattgtgt accattcaaa aaagatcaat gcaatattcg 4081 gcccgttgtt tagtgagctt actaggcaat tactggacag tgttgattcg agcagatttt 4141 tgtttttcac aagaaagaca ccagcgcaga ttgaggattt cttcggagat ctcgacagtc 4201 atgtgccgat ggatgtcttg gagctggata tatcaaaata cgacaaatct cagaatgaat 4261 tccactgtgc agtagaatac gagatctggc gaagattggg ttttgaagac ttcttgggag 4321 aagtttggaa acaagggcat agaaagacca ccctcaagga ttataccgca ggtataaaaa 4381 cttgcatctg gtatcaaaga aagagcgggg acgtcacgac gttcattgga aacactgtga 4441 tcattgctgc atgtttggcc tcgatgcttc cgatggagaa aataatcaaa ggagcctttt 4501 gcggtgacga tagtctgctg tactttccaa agggttgtga gtttccggat gtgcaacact 4561 ccgcgaatct tatgtggaat tttgaagcaa aactgtttaa aaaacagtat ggatactttt 4621 gcggaagata tgtaatacat cacgacagag gatgcattgt gtattacgat cccctaaagt 4681 tgatctcgaa acttggtgct aaacacatca aggattggga acacttggag gagttcagaa 4741 ggtctctttg tgatgttgct gtttcgttga acaattgtgc gtattacaca cagttggacg 4801 acgctgtatg ggaggttcat aagaccgccc ctccaggttc gtttgtttat aaaagtctgg 4861 tgaagtattt gtctgataaa gttcttttta gaagtttgtt tatagatggc tctagttgtt 4921 aaaggaaaag tgaatatcaa tgagtttatc gacctgacaa aaatggagaa gatcttaccg 4981 tcgatgttta cccctgtaaa gagtgttatg tgttccaaag ttgataaaat aatggttcat 5041 gagaatgagt cattgtcaga ggtgaacctt cttaaaggag ttaagcttat tgatagtgga 5101 tacgtctgtt tagccggttt ggtcgtcacg ggcgagtgga acttgcctga caattgcaga 5161 ggaggtgtga gcgtgtgtct ggtggacaaa aggatggaaa gagccgacga ggccactctc 5221 ggatcttact acacagcagc tgcaaagaaa agatttcagt tcaaggtcgt tcccaattat 5281 gctataacca cccaggacgc gatgaaaaac gtctggcaag ttttagttaa tattagaaat 5341 gtgaagatgt cagcgggttt ctgtccgctt tctctggagt ttgtgtcggt gtgtattgtt 5401 tatagaaata atataaaatt aggtttgaga gagaagatta caaacgtgag agacggaggg 5461 cccatggaac ttacagaaga agtcgttgat gagttcatgg aagatgtccc tatgtcgatc 5521 aggcttgcaa agtttcgatc tcgaaccgga aaaaagagtg atgtccgcaa agggaaaaat 5581 agtagtaacg atcggtcagt gccgaacaag aactatagaa atgttaagga ttttggagga 5641 atgagtttta aaaagaataa tttaatcgat gatgattcgg aggctactgt cgccgaatcg 5701 gattcgtttt aaatatgtct tacagtatca ctactccatc tcagttcgtg ttcttgtcat 5761 cagcgtgggc cgacccaata gagttaatta atttatgtac taatgcctta ggaaatcagt 5821 ttcaaacaca acaagctcga actgtcgttc aaagacaatt cagtgaggtg tggaaacctt 5881 caccacaagt aactgttagg ttccctgaca gtgactttaa ggtgtacagg tacaatgcgg 5941 tattagaccc gctagtcaca gcactgttag gtgcattcga cactagaaat agaataatag 6001 aagttgaaaa tcaggcgaac cccacgactg ccgaaacgtt agatgctact cgtagagtag 6061 acgacgcaac ggtggccata aggagcgcga taaataattt aatagtagaa ttgatcagag 6121 gaaccggatc ttataatcgg agctctttcg agagctcttc tggtttggtt tggacctctg 6181 gtcctgcaac ttgaggtagt caagatgcat aataaataac ggattgtgtc cgtaatcaca 6241 cgtggtgcgt acgataacgc atagtgtttt tccctccact taaatcgaag ggttgtgtct 6301 tggatcgcgc gggtcaaatg tatatggttc atatacatcc gcaggcacgt aataaagcga 6361 ggggttcgaa tccccccgtt acccccggta ggggccca //