Path: utzoo!utgpu!watserv1!watmath!att!news.cs.indiana.edu!bionet!will From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Tobacco mosaic virus genome (variant 1) Message-ID: Date: 28 May 91 19:09:08 GMT Sender: will@genbank.bio.net Distribution: bionet Lines: 128 Approved: lear@genbank.bio.net Checksum: 51829 9 LOCUS MTVTMV4 6395 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Tobacco mosaic virus genome (variant 1) ACCESSION V01408 KEYWORDS coat protein; genome. SOURCE Tobacco mosaic virus RNA. ORGANISM Tobacco mosaic virus Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses; Tobamovirus. REFERENCE 1 (bases 1 to 6395) AUTHORS Goelet,P., Lomonossoff,G.P., Butler,P.J., Akam,M.E., Gait,M.J. and Karn,J. TITLE Nucleotide sequence of tobacco mosaic virus RNA JOURNAL Proc. Natl. Acad. Sci. U.S.A. 79, 5818-5822 (1982) STANDARD full automatic COMMENT SWISS-PROT; P03570; COAT$TMV. SWISS-PROT; P03583; V30K$TMV. SWISS-PROT; P03586; V180$TMV. From EMBL entry TOTMV4; dated 13-JUL-1983. BASE COUNT 1862 a 1223 c 1545 g 1765 t ORIGIN 1 gtatttttac aacaattacc aacaacaaca aacaacaaac aacattacaa ttactattta 61 caattacaat ggcatacaca cagacagcta ccacatcagc tttgctggac actgtccgag 121 gaaacaactc cttggtcaat gatctagcaa agcgtcgtct ttacgacaca gcggttgaag 181 agtttaacgc tcgtgaccgc aggcccaagg tgaacttttc aaaagtaata agcgaggagc 241 agacgcttat tgctacccgg gcgtatccag aattccaaat tacattttat aacacgcaaa 301 atgccgtgca ttcgcttgca ggtggattgc gatctttaga actggaatat ctgatgatgc 361 aaattcccta cggatcattg acttatgaca taggcgggaa ttttgcatcg catctgttca 421 agggacgagc atatgtacac tgctgcatgc ccaacctgga cgttcgagac atcatgcggc 481 acgaaggcca gaaagacagt attgaactat acctttctag gctagagaga ggggggaaaa 541 cagtccccaa cttccaaaag gaagcatttg acagatacgc agaaattcct gaagacgctg 601 tctgtcacaa tactttccag acaatgcgac atcagccgat gcagcaatca ggcagagtgt 661 atgccattgc gctacacagc atatatgaca taccagccga tgagttcggg gcggcactct 721 tgaggaaaaa tgtccatacg tgctatgccg ctttccactt ctctgagaac ctgcttcttg 781 aagattcata cgtcaatttg gacgaaatca acgcgtgttt ttcgcgcgat ggagacaagt 841 tgaccttttc ttttgcatca gagagtactc ttaattattg tcatagttat tctaatattc 901 ttaagtatgt gtgcaaaact tacttcccgg cctctaatag agaggtttac atgaaggagt 961 ttttagtcac cagagttaat acctggtttt gtaagttttc tagaatagat acttttcttt 1021 tgtacaaagg tgtggcccat aaaagtgtag atagtgagca gttttatact gcaatggaag 1081 acgcatggca ttacaaaaag actcttgcaa tgtgcaacag cgagagaatc ctccttgagg 1141 attcatcatc agtcaattac tggtttccca aaatgaggga tatggtcatc gtaccattat 1201 tcgacatttc tttggagact agtaagagga cgcgcaagga agtcttagtg tccaaggatt 1261 tcgtgtttac agtgcttaac cacattcgaa cataccaggc gaaagctctt acatacgcaa 1321 atgttttgtc ctttgtcgaa tcgattcgat cgagggtaat cattaacggt gtgacagcga 1381 ggtccgaatg ggatgtggac aaatctttgt tacaatcctt gtccatgacg ttttacctgc 1441 atactaagct tgccgttcta aaggatgact tactgattag caagtttagt ctcggttcga 1501 aaacggtgtg ccagcatgtg tgggatgaga tttcgctggc gtttgggaac gcatttccct 1561 ccgtgaaaga gaggctcttg aacaggaaac ttatcagagt ggcaggcgac gcattagaga 1621 tcagggtgcc tgatctatat gtgaccttcc acgacagatt agtgactgag tacaaggcct 1681 ctgtggacat gcctgcgctt gacattagga agaagatgga agaaacggaa gtgatgtaca 1741 atgcactttc agagttatcg gtgttaaggg agtctgacaa attcgatgtt gatgtttttt 1801 cccagatgtg ccaatctttg gaagttgacc caatgacggc agcgaaggtt atagtcgcgg 1861 tcatgagcaa tgagagcggt ctgactctca catttgaacg acctactgag gcgaatgttg 1921 cgctagcttt acaggatcaa gagaaggctt cagaaggtgc tttggtagtt acctcaagag 1981 aagttgaaga accgtccatg aagggttcga tggccagagg agagttacaa ttagctggtc 2041 ttgctggaga tcatccggag tcgtcctatt ctaagaacga ggagatagag tctttagagc 2101 agtttcatat ggcaacggca gattcgttaa ttcgtaagca gatgagctcg attgtgtaca 2161 cgggtccgat taaagttcag caaatgaaaa actttatcga tagcctggta gcatcactat 2221 ctgctgcggt gtcgaatctc gtcaagatcc tcaaagatac agctgctatt gaccttgaaa 2281 cccgtcaaaa gtttggagtc ttggatgttg catctaggaa gtggttaatc aaaccaacgg 2341 ccaagagtca tgcatggggt gttgttgaaa cccacgcgag gaagtatcat gtggcgcttt 2401 tggaatatga tgagcagggt gtggtgacat gcgatgattg gagaagagta gctgtcagct 2461 ctgagtctgt tgtttattcc gacatggcga aactcagaac tctgcgcaga ctgcttcgaa 2521 acggagaacc gcatgtcagt agcgcaaagg ttgttcttgt ggacggagtt ccgggctgtg 2581 ggaaaaccaa agaaattctt tccagggtta attttgatga agatctaatt ttagtacctg 2641 ggaagcaagc cgcggaaatg atcagaagac gtgcgaattc ctcagggatt attgtggcca 2701 cgaaggacaa cgttaaaacc gttgattctt tcatgatgaa ttttgggaaa agcacacgct 2761 gtcagttcaa gaggttattc attgatgaag ggttgatgtt gcatactggt tgtgttaatt 2821 ttcttgtggc gatgtcattg tgcgaaattg catatgttta cggagacaca cagcagattc 2881 catacatcaa tagagtttca ggattcccgt accccgccca ttttgccaaa ttggaagttg 2941 acgaggtgga gacacgcaga actactctcc gttgtccagc cgatgtcaca cattatctga 3001 acaggagata tgagggcttt gtcatgagca cttcttcggt taaaaagtct gtttcgcagg 3061 agatggtcgg cggagccgcc gtgatcaatc cgatctcaaa acccttgcat ggcaagatcc 3121 tgacttttac ccaatcggat aaagaagctc tgctttcaag agggtattca gatgttcaca 3181 ctgtgcatga agtgcaaggc gagacatact ctgatgtttc actagttagg ttaaccccta 3241 caccagtctc catcattgca ggagacagcc cacatgtttt ggtcgcattg tcaaggcaca 3301 cctgttcgct caagtactac actgttgtta tggatccttt agttagtatc attagagatc 3361 tagagaaact tagctcgtac ttgttagata tgtataaggt cgatgcagga acacaatagc 3421 aattacagat tgactcggtg ttcaaaggtt ccaatctttt tgttgcagcg ccaaagactg 3481 gtgatatttc tgatatgcag ttttactatg ataagtgtct cccaggcaac agcaccatga 3541 tgaataattt tgatgctgtt accatgaggt tgactgacat ttcattgaat gtcaaagatt 3601 gcatattgga tatgtctaag tctgttgctg cgcctaagga tcaaatcaaa ccactaatac 3661 ctatggtacg aacggcggca gaaatgccac gccagactgg actattggaa aatttagtgg 3721 cgatgattaa aaggaacttt aacgcacccg agttgtctgg catcattgat attgaaaata 3781 ctgcatcttt agttgtagat aagttttttg atagttattt gcttaaagaa aaaagaaaac 3841 caaataaaaa tgtttctttg ttcagtagag agtctctcaa tagatggtta gaaaagcagg 3901 aacaggtaac aataggccag ctcgcagatt ttgattttgt agatttgcca gcagttgatc 3961 agtacagaca catgattaaa gcacaaccca agcaaaaatt ggacacttca atccaaacgg 4021 agtacccggc tttgcagacg attgtgtacc attcaaaaaa gatcaatgca atatttggcc 4081 cgttgtttag tgagcttact aggcaattac tggacagtgt tgattcgagc agatttttgt 4141 ttttcacaag aaagacacca gcgcagattg aggatttctt cggagatctc gacagtcatg 4201 tgccgatgga tgtcttggag ctggatatat caaaatacga caaatctcag aatgaattcc 4261 actgtgcagt agaatacgag atctggcgaa gattgggttt tgaagacttc ttgggagaag 4321 tttggaaaca agggcataga aagaccaccc tcaaggatta taccgcaggt ataaaaactt 4381 gcatctggta tcaaagaaag agcggggacg tcacgacgtt cattggaaac actgtgatca 4441 ttgctgcatg tttggcctcg atgcttccga tggagaaaat aatcaaagga gccttttgcg 4501 gtgacgatag tctgctgtac tttccaaagg gttgtgagtt tccggatgtg caacactccg 4561 cgaatcttat gtggaatttt gaagcaaaac tgtttaaaaa acagtatgga tacttttgcg 4621 gaagatatgt aatacatcac gacagaggat gcattgtgta ttacgatccc ctaaagttga 4681 tctcgaaact tggtgctaaa cacatcaagg attgggaaca cttggaggag ttcagaaggt 4741 ctctttgtga tgttgctgtt tcgttgaaca attgtgcgta ttacacacag ttggacgacg 4801 ctgtatggga ggttcataag accgcccctc caggttcgtt tgtttataaa agtctggtga 4861 agtatttgtc tgataaagtt ctttttagaa gtttgtttat agatggctct agttgttaaa 4921 ggaaaagtga atatcaatga gtttatcgac ctgacaaaaa tggagaagat cttaccgtcg 4981 atgtttaccc ctgtaaagag tgttatgtgt tccaaagttg ataaaataat ggttcatgag 5041 aatgagtcat tgtcagaggt gaaccttctt aaaggagtta agcttattga tagtggatac 5101 gtctgtttag ccggtttggt cgtcacgggc gagtggaact tgcctgacaa ttgcagagga 5161 ggtgtgagcg tgtgtctggt ggacaaaagg atggaaagag ccgacgaggc cactctcgga 5221 tcttactaca cagcagctgc aaagaaaaga tttcagttca aggtcgttcc caattatgct 5281 ataaccaccc aggacgcgat gaaaaacgtc tggcaagttt tagttaatat tagaaatgtg 5341 aagatgtcag cgggtttctg tccgctttct ctggagtttg tgtcggtgtg tattgtttat 5401 agaaataata taaaattagg tttgagagag aagattacaa acgtgagaga cggagggccc 5461 atggaactta cagaagaagt cgttgatgag ttcatggaag atgtccctat gtcgatcagg 5521 cttgcaaagt ttcgatctcg aaccggaaaa aagagtgatg tccgcaaagg gaaaaatagt 5581 agtaatgatc ggtcagtgcc gaacaagaac tatagaaatg ttaaggattt tggaggaatg 5641 agttttaaaa agaataattt aatcgatgat gattcggagg ctactgtcgc cgaatcggat 5701 tcgttttaaa tatgtcttac agtatcacta ctccatctca gttcgtgttc ttgtcatcag 5761 cgtgggccga cccaatagag ttaattaatt tatgtactaa tgccttagga aatcagtttc 5821 aaacacaaca agctcgaact gtcgttcaaa gacaattcag tgaggtgtgg aaaccttcac 5881 cacaagtaac tgttaggttc cctgacagtg actttaaggt gtacaggtac aatgcggtat 5941 tagacccgct agtcacagca ctgttaggtg cattcgacac tagaaataga ataatagaag 6001 ttgaaaatca ggcgaacccc acgactgccg aaacgttaga tgctactcgt agagtagacg 6061 acgcaacggt ggccataagg agcgcgataa ataatttaat agtagaattg atcagaggaa 6121 ccggatctta taatcggagc tctttcgaga gctcttctgg tttggtttgg acctctggtc 6181 ctgcaacttg aggtagtcaa gatgcataat aaataacgga ttgtgtccgt aatcacacgt 6241 ggtgcgtacg ataacgcata gtgtttttcc ctccacttaa atcgaagggt tgtgtcttgg 6301 atcgcgcggg tcaaatgtat atggttcata tacatccgca ggcacgtaat aaagcgaggg 6361 gttcgaatcc ccccgttacc cccggtaggg gccca //