Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!zaphod.mps.ohio-state.edu!sdd.hp.com!uakari.primate.wisc.edu!ames!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human germline kappa-immunoglobulin variable region (V-kappa-I) Message-ID: Date: 30 May 91 12:13:00 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 76 Approved: lear@genbank.bio.net Checksum: 07307 4 LOCUS HUMVKI 1394 bp ds-DNA PRI 30-MAY-1991 DEFINITION Human germline kappa-immunoglobulin variable region (V-kappa-I) gene (Va gene) ACCESSION X17262 KEYWORDS immunoglobulin; immunoglobulin light chain; kappa immunoglobulin; kappa light chain. SOURCE Homo sapiens DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (sites) AUTHORS Pech,M., Smola,H., Pohlenz,H.D., Straubinger,B., Gerl,R. and Zachau,H.G. TITLE A large section of the gene locus encoding human immunoglobulin variable regions of the kappa type is duplicated. JOURNAL J. Mol. Biol. 183, 291-299 (1985) STANDARD full staff_review REFERENCE 2 (bases 1 to 1394) AUTHORS Klobeck,H.G. JOURNAL Unpublished (1989) STANDARD full automatic COMMENT *source: developmental stage=germline; tissue=placenta; *source: cell line=placenta St; **map: chromosome=2p12; See for other V kappa immunoglobulin genes. From EMBL entry HSVKI; dated 30-JUL-1990. FEATURES Location/Qualifiers mRNA <185..184 /note="exon 1" misc_feature 2..13 /note="(put.) pd regulatory element" misc_feature 33..42 /note="(put.) dc regulatory element" promoter 75..82 /note="TATA-box" CDS 130..184 /note="leader peptide (AA 1-18) (184 is 1st base in codon)" /codon_start=130 intron 185..310 /note="intron I" mRNA 311..606 /note="exon 2" CDS 311..606 /note="leader peptide/variable region (AA 19-117) (311 is 2nd base in codon)" /codon_start=311 misc_feature 609..615 /note="(non canonical) heptamer recombination signal" BASE COUNT 391 a 308 c 315 g 380 t ORIGIN 1 ctgcagctgt gtccagcctg cccatcctct gctcatttgc atattcccag aacacaacct 61 cctgccctga agacttctta ataggctggt cacacttctt gcaggagtca gacccactca 121 ggacacagca tggacatgag ggtccccgct cagctcctgg ggcttctgct gctctggctc 181 ccaggtaagg aaggagaaca ctaacagttt actcagccca gggggctcag tacagcctgg 241 ctattcaggg aaattctctt actacatgat taattgtgtg gaccatttgt gtttatgctt 301 ccaatctcag gtgccagatg tgccatccag ttgacccagt ctccatcctc cctgtctgca 361 tctgtaggag acagagtcac catcacttgc cgggcaagtc agggcattag cagtgcttta 421 gcctggtatc agcagaaacc agggaaagct cctaagctcc tgatctatga tgcctccagt 481 ttggaaagtg gggtcccatc aaggttcagc ggcagtggat ctgggacaga tttcactctc 541 accatcagca gcctgcagcc tgaagatttt gcaacttatt actgtcaaca gtttaataat 601 taccctcaca tagtgttaca aacccgaaca taaaccccca gggaagcaga tgtgtgagac 661 tgggctgccc cagctgcttc tcctgatgcc tccattggct gagagtgttc ctcagatgca 721 gccacactct gatggtgttg gtagaggagg atatgagatc acctctgcat cccaatttct 781 ttttcttttc tcagccccag ctgcacagac ataacaatgc ctctgctgat ttaataaaga 841 tagagatcat gacacctgaa gagtctagtt tatggctttg gttagaattc atataacaga 901 gaagaagcca ttatagatat tctaagcagg aatagtctta atagatagaa ttagagtcta 961 aagtattgaa gtctaaataa aatgtacaga taaatttagt gttttatttg ctaagaaatt 1021 tttgccaaat ggggcataca ggaaaactca atggtcttca atatgttgga agagcaaaga 1081 gttttataaa aagggaaatt attacctatt gttctttgag aaattttgtt ggctgtagta 1141 agggttggga gctggcaagc tcagactggt aagcagtggt ggtcaaactg aatcctagaa 1201 ttatattaag ttatctcaga agttgtgggt aaatttgctt tcaggttaca ataagccaaa 1261 gcagtgaagc ttgcagagaa ttttgttact gaaatgccag ggattcagta tagatcctgc 1321 ggctcaccac acagaaagcc aatcactaag acaacaagtg ttgtcaaaga acaggcttta 1381 atcaggtgct gcag //