Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!zaphod.mps.ohio-state.edu!sdd.hp.com!uakari.primate.wisc.edu!ames!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Human germline kappa-immunoglobulin variable region (V-kappa-I) Message-ID: Date: 30 May 91 12:13:11 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 67 Approved: lear@genbank.bio.net Checksum: 33352 4 LOCUS HUMVKIB 885 bp ds-DNA PRI 30-MAY-1991 DEFINITION Human germline kappa-immunoglobulin variable region (V-kappa-I) gene (Vb gene) ACCESSION X17263 KEYWORDS immunoglobulin; immunoglobulin light chain; kappa immunoglobulin; kappa light chain. SOURCE Homo sapiens DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (sites) AUTHORS Pech,M., Smola,H., Pohlenz,H.D., Straubinger,B., Gerl,R. and Zachau,H.G. TITLE A large section of the gene locus encoding human immunoglobulin variable regions of the kappa type is duplicated. JOURNAL J. Mol. Biol. 183, 291-299 (1985) STANDARD full staff_review REFERENCE 2 (bases 1 to 885) AUTHORS Klobeck,H.G. JOURNAL Unpublished (1989) STANDARD full automatic COMMENT *source: developmental stage=germline; tissue=placenta; *source: cell line=placenta St; **map: chromosome=2p12; See for other V kappa immunoglobulin genes. From EMBL entry HSVKIB; dated 30-JUL-1990. FEATURES Location/Qualifiers mRNA <186..185 /note="exon 1" misc_feature 2..13 /note="(put.) pd regulatory element" misc_feature 34..43 /note="(put.) dc regulatory element" promoter 76..83 /note="TATA-box" CDS 131..185 /note="leader peptide (AA 1-18) (185 is 1st base in codon)" /codon_start=131 intron 186..309 /note="intron I" mRNA 310..605 /note="exon 2" CDS 310..605 /note="leader peptide/variable region (AA 19-117) (310 is 2nd base in codon)" /codon_start=310 misc_feature 608..614 /note="(non canonical) heptamer recombination signal" BASE COUNT 207 a 240 c 208 g 230 t ORIGIN 1 ctgcagctgc gcccagcctg ccccatcccc tgctcatttg catgttccca gagcacagtc 61 tcctgacctg aagacttatt aacaggctga tcacaccctg tgcaggagtc agacccagtc 121 aggacacagc atggacatga gggtccccgc tcagctcctg gggctcctgc tgctctggtt 181 cccaggtaag aaaggagaac actaggatta tactcggtca gtgtgctgag tactgcttta 241 ctattcaggg aacttctctt acagcatgat taattgtgtg gacatttgtt tttatgtttc 301 caatctcagg ttccagatgc gacatccaga tgacccagtc tccatcttct gtgtctgcat 361 ctgtaggaga cagagtcacc atcacttgtc gggcgagtca gggtattagc agctggttag 421 cctggtatca gcagaaacca gggaaagccc ctaagctcct gatctatgct gcatccagtt 481 tgcaaagtgg ggtcccatca aggttcagcg gcagtggatc tgggacagat ttcactctca 541 ctatcagcag cctgcagcct gaagattttg caacttacta ttgtcaacag gctaacagtt 601 tccctcccac agtgttacca acccgaacat aaacccccag ggaagcagat gtgtgaagct 661 gggctgcccc agctgctcct cctgatgcct ccattggctg agagtgttgc tcagatgcag 721 ccacactctg atggtgttgg tagaggggta cgtgaaatcg cctctgcacc ctaattcttt 781 tctctttctc agccccaact gcacagacat agcaatgcat ctcctgattt gataaataca 841 gagatcatga cacttgagga gtctagttta tggcttcagc ttgaa //