Path: utzoo!utgpu!news-server.csri.toronto.edu!rpi!zaphod.mps.ohio-state.edu!sol.ctr.columbia.edu!ucselx!bionet!root From: GenBank-Updates@genbank.bio.net Newsgroups: bionet.molbio.genbank.updates Subject: Potato leafroll luteovirus (Canadian isolate) genomic RNA, complete Message-ID: Date: 30 May 91 12:15:58 GMT Sender: root@genbank.bio.net Distribution: bionet Lines: 124 Approved: lear@genbank.bio.net Checksum: 63797 9 LOCUS PLVRC 5883 bp ss-RNA VRL 30-MAY-1991 DEFINITION Potato leafroll luteovirus (Canadian isolate) genomic RNA, complete sequence. ACCESSION D00734 KEYWORDS RNA polymerase; coat protein. SOURCE Potato leafroll luteovirus (Canadian isolate), cDNA to viral RNA, clones pLP93, pLP79 and pB2a. ORGANISM Potato leaf roll virus Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses; Luteovirus. REFERENCE 1 (bases 1 to 5883) AUTHORS Keese,P., Martin,R.R., Kawchuk,L.M., Waterhouse,P.M. and Gerlach,W.L. TITLE Nucleotide sequences of an Australian and a Canadian isolate of potato leafroll luteovirus and their relationships with two European isolates JOURNAL J. Gen. Virol. 71, 719-724 (1990) STANDARD full staff_review COMMENT There were six major open reading frames. FEATURES Location/Qualifiers virion 1..5883 /note="potato leafroll luteovirus RNA genome" BASE COUNT 1647 a 1484 c 1424 g 1328 t ORIGIN 5' end of viral RNA. 1 acaaaagaat accaggagaa attgcagctt tagcgcacaa actctacact cattgcaaac 61 gttatagcat atgattgtat tgacccagtc tggaatcttg ctttttgacc aaagatttaa 121 actttcaaag tttctcttcg ttgtcattgc aacaggcttt cctcttctcc tgcagcaagc 181 gagcttaatt tacggataca gtcatgaaca gatttaccgc atatgccgct cttttcttta 241 cattctccct ttgctcaact gcaaaagagg caggatttca acatccggcc ttcaactttc 301 gaggcacctc cactatgagt gccttgagtg gggattactc tgcggcaccc accccgctat 361 acaaatcgtg ggccctacca tcgtcattaa acttgacgac ccaaccaccg ccgccgctta 421 cagatcggag ctactacgag ttagttcaag ctcttatatc caaaatgcgg ctggattgtc 481 aaacggttgg ggacatgaca tggaggcatt tgtcagaaat gctatttgcc tcctggaact 541 ccgtgaaaga agtatccctc aaagcggcct ccgtgacctt atgggcaatt atcaacattt 601 ggttcggtct ttattggacg cttgcgaggt tgatcacttt gttcctctgg actttcagca 661 tagaagcctt ttgcttaatt ttgctcggtt gtataaccag cttgatctac aagggcgcgc 721 taagtctttc agagcactta ccggttttcc gtttaatctc ccctctgaag attatttgga 781 gggcagcttt ctccaaaagg aattacaaga atgagagggc tgtggaagga tacaaagggt 841 tttcggtccc acagaaaccg ccaaagtctg ccgtaattga actacaacat gaaaacggca 901 gccatctcgg gtacgcgaac tgcattcgct tatacagtgg agagaacgcc ttggtgacag 961 ctgaacactg tctagaaggc gctttcgcaa cgtcgttgaa aactggaaac aggattccga 1021 tgtcgacttt cttccccatt tttaaaagtg cccgtaatga tatctccata ctagtaggtc 1081 cacccaactg ggaaggtcta ctatcagtca aaggagctca tttcattaca gctgacaaaa 1141 tcggcaaagg tcctgcctct ttctacactc ttgagaaagg ggagtggatg tgccatagtg 1201 ccaccataga tggagcccat caccagttcg tgtctgtttt atgcaacact gataccggat 1261 attccggaac agggttttgg tcttcaaaga atctgcttgg tgtgcttaaa ggcttcccac 1321 tggaagaggg atgtaactac aatgttatgt ctgttatacc ctcagtccca ggaatcactt 1381 ccccaaatta tgtgtttgag tcgaccgccg taaaaggccg cgtcttctcg gatgaagctg 1441 tgaaagagct agagcgggaa gcatccgaag ccgtcaagaa gcttgccaga tttaaatcac 1501 ttgccggcaa gaactgggct gatgattatg actccgatga ggattacggt ctggagagag 1561 aggctgcaac aaatgcgccc gcagagaaaa ctgctcaaac aaactcagca gagaagactg 1621 ctccatcaac ttcagcagag aaaactgctc caacaaacaa gcctttaaat gggcaagcgg 1681 caccgtccgc caaaacaaac ggcaactccg acatccccga cgccgctaca agcgcaccac 1741 caatgaacaa aatggtcgaa cagatcatca cagctatggt ggggagaatc aatctctcgg 1801 agatagagga gaagatagag tgcagggtgt ctcagaaagc cctgcagaag cccaaacaaa 1861 agaaacgcgg aaggcgtgga gggaagaaca agcaaaacaa tttacctcct acttcgacgc 1921 aatctataag tggggcgccc aagaaggagg ctgcccccca ggcttcagga agtgcgggaa 1981 tatccccggt tactaccacc cccgcaccag aggtcaaacc aagtgggggc aaaaactctg 2041 ccaagttcat cccgagctgg cggagaaaac agcaggattc ggctggccaa aagccggatc 2101 tgaagctgag ctccaaagcc tgaatctaca ggctgccagg tggctccaac gcgcggagtc 2161 ggccactatc cctggcgcag aagcaagaaa acgcgtgatt gagaaaacag tggagacata 2221 cagaaattgt gtaactaacg ccccactgtg ctcccttaaa tccaaactgg attgggctgg 2281 ctttcaacaa gatatccgtg aagcagtcca gtcccttgag ctagacgctg gtgtaggcat 2341 tccctatatc gcgtatggcc tccccacaca ccgaggatgg gttgaggacc ataagcttct 2401 cccagtgctc actcagctga cctttgaccg actacagaag atgtcggagg ccagctttga 2461 ggatatgagc gcagaagagc tggttcaaga agggctctgt gatcctatca gactatttgt 2521 caaaggagag ccccacaaac agagcaaact cgatgaaggc cgctacctcc tcatcatgtc 2581 tgtttccttg gtggatcaac tggtagcccg ggttctgttc caaaatcaga acaaaaggga 2641 aatttccctg tggaggtctg tgccttccaa acccggtttt ggcctttcaa ctgacactca 2701 aactgctgaa ttcttggagt gtcttcaaaa ggtgtatgga gcgccatctg tggaagaatt 2761 gtgtgcaaat cacaaggagt acacgcgctc aaccgactgt tccggtttcg actggtcagt 2821 cgcgtattgg atgctggagg atgatatgga ggtgagaaat cgcctgacat ttaataacac 2881 ccagctcacc aagcgtcttc gggctgcctg gttgaagtgc ataggaaact ccgtcttatg 2941 cctgtccgat ggcactttac ttgcccaaac tgttcccggt gtgcaaaaga gcggaagtta 3001 caatacaagt tcctccaact ctagaatccg ggttatggct gcctatcact gtggcgccga 3061 ctgggcaatg gccatggggg acgatgccct cgaagccccc aactccgacc tggaggagta 3121 taaaacacta ggtttcaaag tcgaggtagg tcgagaactc gaattctgtt cacacatctt 3181 cagaaatccg accctcgccg ttccggtcaa taccaacaaa atgctttaca agttgatcca 3241 tggttataat ccggaatgtg gcaatccaga agtgattcaa aactatctgg ctgcagtatt 3301 ctctgtgctg caggagctca gacacgatcg tgagctcgtt gccaagctcc accagtggtt 3361 ggttccgagt gccaccacaa aagaacactg aaggagctca ctaaaactag ccaagcataa 3421 gcgagttgca agcattggaa gttcaagcct cgttacatca accggacaaa atagattata 3481 aattcttagc gggattcgct ttaggatttt catccgcaat cccattttca gtagccggtt 3541 tatattttgt ttacctaaag atttcctccc acgtgcgatc aattgttaat gagtacggtc 3601 gtggttaaag gaaatgtcaa tggtggtgta caacaaccaa gaaggcgaag aaggcaatcc 3661 cttcgcaggc gcgctaacag agttcagcca gtggttatgg tcacggcccc tgggcaaccc 3721 aggcgccgaa gacgcagaag aggaggcaat cgccgctcaa gaagaactgg agttccccga 3781 ggacgaggct caagcgagac attcgtgttt acaaaggaca acctcgtggg caactcccaa 3841 ggaagtttca ccttcgggcc gagtctatca gactgtccgg cattcaagga tggaatactc 3901 aaggcctacc atgagtataa gatcacaagc atcttacttc agttcgtcag cgaggcctct 3961 tccacctcct ccggttccat cgcttatgag ttggaccccc attgcaaagt atcatccctc 4021 cagtcctacg tcaacaagtt ccaaattacg aagggcggcg ccaaaactta tcaagcgcgg 4081 atgataaacg gggtagaatg gcacgattct tctgaggatc agtgccggat actgtggaag 4141 ggaaatggaa aatcttcaga tcccgcagga tccttcagag tcaccatcag ggtggctttg 4201 caaaacccca aataggtaga ctccggatca gagcctggtc caagcccaca accaacaccc 4261 actccaactc cccagaagca cgagagattt attgcttacg ttggcatacc tatgctaacc 4321 attcaagcta gggagaacga cgaccaaatc atattgggtt ccttagggag ccaaaggatg 4381 aaatatatag aggacgagaa ccagaactat acaaatatta gttctgagta ttactctcaa 4441 tcgagtatgc aagccgtccc tatgtattat ttcaatgtcc cgaaagggca atggtcagtc 4501 gatatcagct gcgaagggta tcaacccact agcagcacct cggatccaca ccggggtagg 4561 agtgacggga tgatcgcgta ttcaaacgcg gattccgatt actggaatgt tggtgaagcg 4621 gatggtgtca aaatttcgaa gctacgcaac gataacacct accgccaagg tcacccagaa 4681 cttgaaatta actcgtgtca ttttcgcgag ggccaactcc ttcaacggga cgctacaatt 4741 agcttccacg ttgaagcgcc tactgatggg cgattctttc tcgttggtcc cgctatccag 4801 aaaaccgcaa agtataacta tactatctca tacggtgact ggacggaccg agacatggag 4861 ctggggctga tcactgtggt gcttgatgaa catttagaag gcactggttc ggctaacaga 4921 gtgcggcggc ccccacggga gggccacatc tatatggcgt cggcgcgcga accggaagga 4981 aaaccggttg gaaataaacc aagggacgaa accccgatac aaacgcagga aagacaacct 5041 gatcaaactc cgcctgacga cgtatccgat gctggttcgg taaacagcgg cggctcaact 5101 gagtcgctgc aattggagtt cggagcaaac tcagatagta cccacgatgc tacagtcgat 5161 ggtacagact ggcccagaat tcctccacca aggcacccac ccgaacttag agtttccggc 5221 aattcaagaa ctgttactga cttttctccg aaagccgatc tattggagaa ttgggatgcc 5281 gaacacttcg accctggtta ttccaaagaa gatgtcgctg ctgctactat tatagcgcac 5341 ggcagtattc aagatgggcg aagtatgctg gagaagagag aggaaaatgt caagaacaaa 5401 acctcctcct ggaagccccc gttacctaaa gcggtgagcc cagccatagc caaattgcgc 5461 tcgattcgca aatcccaacc cctcgaggga gggaccctta agaaagacgc cacgtatggt 5521 gtctcatcta ttggcagtgg ttctctaaca ggtggcacgc ttaagaggaa ggcaactatt 5581 gaagagcgtt tactgcagac cttaacaact gaacaaaggc tgtggtacgc gaatttgaag 5641 aaaactaacc ctccagctgc cacccaatgg ctgtttgaat atcagccacc tccccaagta 5701 gatagaaaca tagctgaaaa tccattccaa gggaggaaat gagtcgactc acgacttaaa 5761 actgagtgtc cgccggacat taagcggaac gaaagccgaa aggtgattag gctctcaacg 5821 cctgctagag accgtcgaaa gacgccactg tgtagccagg atcctcttac agggttgtgt 5881 agt //