Path: utzoo!utgpu!watmath!uunet!bionet!ig!biovax.rutgers.edu!elliston From: elliston@BIOVAX.RUTGERS.EDU Newsgroups: bionet.molbio.bio-matrix Subject: Info on searching protocols... Message-ID: <8811081605.AA19384@presto.ig.com> Date: 8 Nov 88 15:07:00 GMT Sender: daemon@presto.ig.com Reply-To: Lines: 24 I need some info, or pointers to info, on several searching algorithms for nucleic acid sequences. these are: 1) Wilbur - lipman 2) Needleman-Wensch/Smith-Waterman 3) fastA can anyone explain these to me in a language that a molecular biologist can understand (albeit a computer literate mol. biologist)? Thanks Keith ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Keith O. Elliston | Waksman Institute Bitnet: ELLISTON@BIOVAX | P.O. Box 759 Arpanet: ELLISTON@biovax.rutgers.edu | Rutgers, The State U. of NJ AT&T: (201)932-3801 | Piscataway, NJ 08855-0759 USA ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ "...for with friends men are more able both to think and to act." -Aristotle ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ------